BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C06LP1|AL430197
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1174 1790 0.0
>3x_Contig1174
Length = 6106
Score = 1790 bits (901), Expect = 0.0
Identities = 904/907 (99%)
Strand = Plus / Plus
Query: 1 aatcaattatatgggaatccgaacaggagcctcagagcaagaagacctattctccattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 aatcaattatatgggaatccgaacaggagcctcagagcaagaagacctattctccattag 1761
Query: 61 atgttgaaacgtttagtcaaaaaatgaacttggattcagcaagacctgactcgaagactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1762 atgttgaaacgtttagtcaaaaaatgaacttggattcagcaagacctgactcgaagactt 1821
Query: 121 tatcgttcatccagactcttcaaaagcttttagagtctgagcaacaatacttcgaaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1822 tatcgttcatccagactcttcaaaagcttttagagtctgagcaacaatacttcgaaatgt 1881
Query: 181 tgagtctatgtttatcaacttacaaggaagaagcatgccacaacaagaaatttaggaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1882 tgagtctatgtttatcaacttacaaggaagaagcatgccacaacaagaaatttaggaaca 1941
Query: 241 aattgttgaatagagcttcaaacgatgagctattgttgtttgggaatttagatacgatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1942 aattgttgaatagagcttcaaacgatgagctattgttgtttgggaatttagatacgatgg 2001
Query: 301 cagagttaagtwaattattctgcaaaaatttatcagaatgcttgawagtgacagatgctg 360
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2002 cagagttaagtaaattattctgcaaaaatttatcagaatgcttgaaagtgacagatgctg 2061
Query: 361 gtactcagagcaggatttggaaggaaattaaagggagtgacaagttatgtcaaattatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2062 gtactcagagcaggatttggaaggaaattaaagggagtgacaagttatgtcaaattatac 2121
Query: 421 ttgatactgatttctctacgttgataaaatctcatttacatagaatcaagtccccatatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 ttgatactgatttctctacgttgataaaatctcatttacatagaatcaagtccccatatc 2181
Query: 481 atagctactgcatctgtcatgaggaaaggaaacgatttctagactcgatcaaattgcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 atagctactgcatctgtcatgaggaaaggaaacgatttctagactcgatcaaattgcaaa 2241
Query: 541 acacggaaacgttttacaagtggtacgagttatgcttaahaaaatcacaatttgagaagt 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2242 acacggaaacgttttacaagtggtacgagttatgcttaaaaaaatcacaatttgagaagt 2301
Query: 601 tagaagacctcttggagttgccattggagaggctaggccaatgggggtcattgttcgaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2302 tagaagacctcttggagttgccattggagaggctaggccaatgggggtcattgttcgaga 2361
Query: 661 acttatgtttatttggtgacaatttgctatcaccagaacggtctgttcagatgaatgcga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2362 acttatgtttatttggtgacaatttgctatcaccagaacggtctgttcagatgaatgcga 2421
Query: 721 tatcaaaagaatacattagttatctaagggatctaaacgatgaactaaataattccggac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2422 tatcaaaagaatacattagttatctaagggatctaaacgatgaactaaataattccggac 2481
Query: 781 gtgcaaaggaaagcattttaggagaagaaaatgcggtgactcaagaaaaggagaatgaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2482 gtgcaaaggaaagcattttaggagaagaaaatgcggtgactcaagaaaaggagaatgaca 2541
Query: 841 acatttcttcaaaatctggatcccgtggaggttcacaaatttccaaatcatctagttttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2542 acatttcttcaaaatctggatcccgtggaggttcacaaatttccaaatcatctagttttt 2601
Query: 901 attcaga 907
|||||||
Sbjct: 2602 attcaga 2608
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7037
Number of Sequences: 1807
Number of extensions: 7037
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)